The underside of your slide out is covered with a material called Draco. That material is wrapped completely around the under side of the slide and wrapped around the top side of the floor inside your slide out. After that is wrapped around, the walls are attached to the bottom.
So, any attempt to remove the Draco and replace it with something else is not a good idea.
Those rollers are notorious for rubbing and tearing up the Draco material. There are slide "skies" that can be installed under the slide for those rollers to slide on, thus preventing any further damage to the Draco.
My camper is doing the same thing. I'm been tossing black Rust-o-lium paint on the exposed wood for a few months now to keep the wood covered and protected as much as possible until I can get the sleds or skies for the roller.
Still, the Draco should not be removed. It will cause more issues than you have now.
You also need to make sure the L shaped trim at the bottom edge of the slide actually drips water off and that when it rains, that water does not weep back under the slide, making the torn Draco and exposed wood wet. You can't stop it all, but you can slow it down until you get it covered with something like, those those sleds:
Check out this thread and watch the video in the first post.
Click here.
Also, the Skies can be found pretty easy. Here's one source. There are many more:
Click here.